Vertical stratification of the water microbiome in an electric water heater tank

Description

The raw sequence reads have been submitted to the NCBI Sequence Read Archive (SRA) under the BioProject PRJNA961987 with the following BioSample numbers: SAMN39596420, SAMN39596421, SAMN39596422, SAMN39596423, SAMN39596424, SAMN39596425, SAMN39596426, SAMN39596427, SAMN39596428, SAMN39596429, SAMN39596430, SAMN39596431, SAMN39596432, SAMN39596433, SAMN39596434, SAMN39596435, SAMN39596436, SAMN39596437, and SAMN39596438.

A table (Table_diversity_indices.xlsx) contains rows as samples with ID, columns as distance from top to bottom (cm), sample volume (L), flushed volume (L), diversity indices (Chao and Shannon), and water temperature (°C) for each Set of samples.

A table (Table_Legiolert.xlsx) contains rows as samples with ID, columns as distance from top to bottom (cm), sample volume (L), flushed volume (L), abundance of cultured Legionella pneumophila (MPN/100mL), and water temperature (°C) for each Set of samples.

A table (Table_qPCR_L_pneumophila.xlsx) contains rows as samples with ID, columns as distance from top to bottom (cm), sample volume (L), flushed volume (L), copy number of L. pneumophila (GCN/100mL), and water temperature (°C) for each Set of samples.

A table (Table_qPCR_Legionella.xlsx) contains rows as samples with ID, columns as distance from top to bottom (cm), sample volume (L), flushed volume (L), copy number of Legionella spp. (GCN/100mL), and water temperature (°C) for each Set of samples.

A table (Table_qPCR_Mycobacterium.xlsx) contains rows as samples with ID, columns as distance from top to bottom (cm), sample volume (L), flushed volume (L), copy number of Mycobacterium spp. (GCN/100mL), and water temperature (°C) for each Set of samples.

A table (Table_qPCR_V_vermiformis.xlsx) contains rows as samples with ID, columns as distance from top to bottom (cm), sample volume (L), flushed volume (L), copy number of V. vermiformis (GCN/100mL), and water temperature (°C) for each Set of samples.

An abundance matrix (Table_taxonomy.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a number of reads obtained for each Set of samples.

A table (Table_water_temperature.xlsx) contains rows as water samples with ID, columns as temperature (°C and °F) measured from the top, bottom and drain of the water tank for each Set of samples.

This dataset is associated with the following publication:
Gomez-Alvarez, V., H. Ryu, M. McNeely, C. Muhlen, D. Williams, D. Lytle, and L. Boczek. Vertical Stratification of the Water Microbiome in an Electric Water Heater Tank: implications for premise plumbing opportunistic pathogens. JOURNAL OF WATER AND HEALTH. IWA Publishing, London, UK, 22(12): 2346–2357, (2024).

Resources

Name Format Description Link
Table_diversity_indices.xlsx XLS Table_diversity_indices.xlsx Open resource
Table_Legiolert.xlsx XLS Table_Legiolert.xlsx Open resource
Table_qPCR_Legionella.xlsx XLS Table_qPCR_Legionella.xlsx Open resource
Table_qPCR_L_pneumophila.xlsx XLS Table_qPCR_L_pneumophila.xlsx Open resource
Table_qPCR_Mycobacterium.xlsx XLS Table_qPCR_Mycobacterium.xlsx Open resource
Table_qPCR_V_vermiformis .xlsx XLS Table_qPCR_V_vermiformis%20.xlsx Open resource
Table_taxonomy.xlsx XLS Table_taxonomy.xlsx Open resource
Table_water_temperature.xlsx XLS Table_water_temperature.xlsx Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596420 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596421 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596422 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596423 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596424 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596425 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596426 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596427 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596428 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596429 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596430 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596431 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596432 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596433 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596434 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596435 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596436 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596437 Unknown Open resource
https://www.ncbi.nlm.nih.gov/biosample/SAMN39596438 Unknown Open resource

Tags

Topics

Categories