Sequence Read Archive (SRA)

Description

The Sequence Read Archive (SRA) stores sequencing data from the next generation of sequencing platforms including Roche 454 GS System®, Illumina Genome Analyzer®, Life Technologies AB SOLiD System®, Helicos Biosciences Heliscope®, Complete Genomics®, and Pacific Biosciences SMRT®.

Resources

Name Format Description Link
21 https://www.ncbi.nlm.nih.gov/sra
21 BLASTN programs search SRA databases using a nucleotide query. https://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=blastn&BLAST_PROGRAMS=megaBlast&PAGE_TYPE=BlastSearch&BLAST_SPEC=SRA&SHOW_DEFAULTS=on
21 The Run Selector can select runs from one or more studies to download or analyze with the SRA Toolkit. To retrieve data from SRA, you must download the SRA Toolkit. https://www.ncbi.nlm.nih.gov/Traces/study/
21 Search and browse data for a single RUN https://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=run_browser
21 The SRA accepts genetic data and the associated quality scores produced by next generation sequencing technologies. Before submitting, read the SRA Submission Wizard Help. https://www.ncbi.nlm.nih.gov/sra/docs/submitportal/ https://submit.ncbi.nlm.nih.gov/subs/sra/

Tags

  • tools-utilities
  • genomics
  • genetics

Topics

Categories