Results of flow-FISH for RNA degradation

Description

Flow cytometry measurements of FISH-labeled RNA at timepoints following rifampicin addition. These data folders contain raw data (.fcs files), analysis files, and summary statistics ("summary.csv") for each experiment. The "v1" data represent biological replicates. The "v2" data represent technical replicates of the original sample preparations for each experiment. Both "v2" datasets were collected on July 16, 2021.

Resources

Name Format Description Link
5 01-5xSSC-G8.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-07-01_v1/01-5xSSC-G8.fcs
5 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-07-01_v2/01-pAN1201.eT.pQ.00-B1.fcs_pkl
5 01-5xSSC-E6.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-E6.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-F12.fcs.sha256
5 01-5xSSC-F2.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-F2.fcs
5 01-5xSSC-F3.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-F3.fcs
5 01-5xSSC-F6.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-F6.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-F6.fcs.sha256
5 01-5xSSC-F8.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-F8.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-F8.fcs.sha256
5 01-5xSSC-F9.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-F9.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-F9.fcs.sha256
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G2.fcs.sha256
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G3.fcs.sha256
5 01-5xSSC-G5.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G5.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G5.fcs.sha256
5 01-5xSSC-G6.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G6.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G6.fcs.sha256
5 01-5xSSC-G8.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G8.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G8.fcs.sha256
5 01-5xSSC-G9.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G9.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-5xSSC-G9.fcs.sha256
5 01-pAN1201.eT.pQ.00-B1.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pAN1201.eT.pQ.00-B1.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pAN1201.eT.pQ.00-B1.fcs.sha256
5 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pAN1201.eT.pQ.00-B1.fcs_pkl
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pAN1201.eT.pQ.00-E1.fcs_pkl.sha256
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eQ.00-D7.fcs.sha256
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5 01-pSB223_251.eQ.00.star-G7.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eQ.00.star-G7.fcs
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47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.00.star-G4.fcs.sha256
5 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.00.star-G4.fcs_pkl
5 01-pSB223_251.eT.pQ.00-D1.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.00-D1.fcs
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5 01-pSB223_251.eT.pQ.01-C10.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.01-C10.fcs
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47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.01-C10.fcs_pkl.sha256
5 01-pSB223_251.eT.pQ.02-C7.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.02-C7.fcs
5 01-pSB223_251.eT.pQ.04-C4.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.04-C4.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.04-C4.fcs.sha256
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.04-C4.fcs_pkl.sha256
5 01-pSB223_251.eT.pQ.04.star-F10.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.04.star-F10.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.04.star-F10.fcs.sha256
5 01-pSB223_251.eT.pQ.04.star-F4.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.04.star-F4.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.08-C1.fcs_pkl.sha256
5 01-pSB223_251.eT.pQ.08.star-F1.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.08.star-F1.fcs
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.16-B10.fcs.sha256
5 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.16-B10.fcs_pkl
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5 01-pSB223_251.eT.pQ.16.star-E10.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.16.star-E10.fcs
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5 01-pSB223_251.eT.pQ.64-B4.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/01-pSB223_251.eT.pQ.64-B4.fcs
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47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/2021-06-10_RNA-degradation_layout.csv.sha256
5 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/2021-06-10_summary.frame_pkl
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/2021-06-10_summary.frame_pkl.sha256
5 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/5xSSC-A3.FL1-A.back_fit.stan_samp_pkl
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47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/5xSSC-A3.FL9-A.back_fit.stan_samp_pkl.sha256
33 cell%20vs.%20background%20gating%20plots.pdf https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/cell%20vs.%20background%20gating%20plots.pdf
33 Stan%20background%20fit.FL4-A.pdf https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/Stan%20background%20fit.FL4-A.pdf
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/Stan%20background%20fit.FL4-A.pdf.sha256
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47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/Jupyter%20notebooks/Auto%20Gating.ipynb.sha256
5 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v1/Jupyter%20notebooks/Plots%20and%20output.ipynb
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v2/01-5xSSC-A1.fcs.sha256
47 https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v2/01-5xSSC-A2.fcs.sha256
5 01-5xSSC-A3.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v2/01-5xSSC-A3.fcs
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5 01-5xSSC-B11.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v2/01-5xSSC-B11.fcs
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5 01-5xSSC-D3.fcs https://data.nist.gov/od/ds/ark:/88434/mds2-2437/2021-06-10_v2/01-5xSSC-D3.fcs
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Tags

  • single-cell
  • fish
  • flow-cytometry

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