Description
The EX_Genome_Assemblies.zip file contain the contig sequences (i.e. assembly) of fifteen isolates used for genomic and antibiotic resistance genes (ARG) analysis.
EX_OTU.fasta file contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU).
This dataset is associated with the following publication:
Gomez-Alvarez, V., S. Pfaller, J. Pressman, D. Wahman, and R. Revetta. Resilience of microbial communities in a simulated drinking water distribution system subjected to disturbances: role of conditionally rare taxa and potential implications for antibiotic-resistant bacteria. Environmental Science: Water Research & Technology. Royal Society of Chemistry, Cambridge, UK, 2: 645-657, (2016).
Resources
| Name | Format | Description | Link |
|---|---|---|---|
| EX_Genome_Assemblies.zip | ZIP | EX_Genome_Assemblies.zip | Open resource |
| EX_OTU.fasta.zip | ZIP | EX_OTU.fasta.zip | Open resource |
| https://trace.ncbi.nlm.nih.gov/Traces/sra/?study=SRP069876 | Unknown | Open resource |