Description
Proton irradiation is touted for its improved tumor targeting due to the physical advantages of ion beams for radiotherapy. Recent studies from our laboratory have shown that in addition to targeting advantages proton irradiation can inhibit angiogenic and immune factors and thereby modulate tumor progression. High-energy protons also constitute a principal component of the galactic cosmic rays to which astronauts are exposed. Increased understanding of the biological effects of proton exposure would thus contribute to both improved cancer therapy and carcinogenesis risk assessment for space travel. In addition age plays a major role in tumor incidence and is a critical consideration for estimating cancer risk. We investigated the effects of host age and proton exposure on tumor progression. Tumor lag time and growth dynamics were tracked following injection of murine Lewis lung carcinoma (LLC) cells into young (68 day) versus old (736 day) mice with or without coincident irradiation. Tumor progression was suppressed in old compared to young mice. Differences in progression were further modulated by proton irradiation (1GeV) with increased inhibition evident in old mice. Through global transcriptome analysis TGFB1 and TGFB2 were determined to be key players that contributed to the tumor dynamics observed. These findings point to older hosts providing decreased systemic tumor support which can be further inhibited by proton irradiation. Overall design: For genome-wide expression profiling of tumor tissue Mouse WG-6 BeadArray chips (Illumina San Diego CA) were used. Total RNA was amplified with the Ambion Illumina TotalPrep Amplification Kit (Ambion Austin TX) and labeled from all replicate biological samples for each condition. For tumor replicates thirty tumor samples from adolescent and thirty tumor samples from old mice for a total of 60 tumor samples were used. All replicate samples were run individually. For each age group ten tumor samples had received proton irradiation while twenty tumor samples were from unirradiated mice (as described above). Total RNA was isolated and purified using TRIzol (Invitrogen) and quantified using an Agilent Bioanalyzer. Samples were deemed suitable for amplification and hybridization if they had 28s/18s = 2:1 RIN >7. Total RNA of 500ng per sample was amplified using AmbionTotalPrep and 1.5ug of the product was loaded onto the chips. Following hybridization at 55C the chips were washed and then scanned using the Illumina iScan System. The data was checked with GenomeStudio (Illumina) for quality control. In GenomeStudio data was background subtracted and rank invariant normalization was applied. Data was imported into MultiExperiment Viewer MeV for statistical analysis. The statistically significant genes were determined using MeV by applying a one-way ANOVA analysis with standard Bonferroni correction with a FDR <0.05 that resulted in a list of significant genes. Average gene expression signals <10 were filtered out due to signal being
Resources
| Name | Format | Description | Link |
|---|---|---|---|
| AIAA at LM_0004.wmv | Unknown | PPT WMV - Jeff Baranek - LM | Open resource |
| AIX_AeroservoelasticsWorkshop_20120418.pdf | Ares 1-X Aeroelastic and Structural Dynamics Modeling for GN&C Simulations (PDF) - Eugene Heim - NASA Langley | Open resource | |
| AIX_AeroservoelasticsWorkshop_20120418.pptx | Unknown | Ares 1-X Aeroelastic and Structural Dynamics Modeling for GN&C Simulations (PPT) - Eugene Heim - NASA Langley | Open resource |
| Ares I-X Assembly RollOut and Flight Composite.m4v | Unknown | Ares 1-X Assembly Roll Out and Flight MOV - Eugene Heim - NASA Langley | Open resource |
| ASE Sim Agenda.docx | Unknown | Workshop Agenda | Open resource |
| ASE_SimWrkshop_April2012.ppt | Powerpoint | Aeroservoelasticity & Reduced Order Models - Walt Silva - NASA Langley | Open resource |
| ASE Welcome.ppt | Powerpoint | Peter Coen's Greeting - NASA Langley | Open resource |
| ASE_Workshop_18April2012.pdf | Sim Study of Impact of ASE on Flying Qualities of a High Speed Civil Transport (HSCT) (PDF) - Dave Raney - NASA Langley | Open resource | |
| BDCfullres.mov | Unknown | PPT Movie - Dave Raney - NASA Langley | Open resource |
| bff01-1.avi | Unknown | PPT AVI - Jeff Baranek - LM | Open resource |
| Briefing 2012 NASA ASE Workshop.pptx | Unknown | Structural Modes and Aircraft Handling Qualities - Brandon Cowen - Adaptive Aerospace Group (AAG) | Open resource |
| buff01a.jpg | JPG | PPT JPG 2 - Dr Ned Lindsley - AFRL | Open resource |
| buff01.jpg | JPG | PPT JPG 1 - Dr Ned Lindsley - AFRL | Open resource |
| DFS MAD.MUTT Presentation 041812.pptx | Unknown | Dynamic Flight Simulation for MAD MUTT (PPT) - P. C. Chen - Zonatech | Open resource |
| DFS MAD.MUTT Presentation 041812 with movies.pdf | Dynamic Flight Simulation for MAD MUTT (PDF) - P. C. Chen - Zonatech | Open resource | |
| F16_m0700_h03000_AIM9_F0_half_speed25fps_4.avi | Unknown | PPT AVI 1 - Dr Ned Lindsley - AFRL | Open resource |
| FLTM152.avi | Unknown | PPT AVI 1 - P. C. Chen - Zonatech | Open resource |
| FLTMODE3_avi_bff_tecplot.avi | Unknown | PPT AVI 2 - P. C. Chen - Zonatech | Open resource |
| FLTMODE4_avi_awbt_tecplot.avi | Unknown | PPT AVI 3 - P. C. Chen - Zonatech | Open resource |
| FLTMODE4_avi_swbt_tecplot.avi | Unknown | PPT AVI 4 - P. C. Chen - Zonatech | Open resource |
| FLTMODE5_avi_awbt_tecplot.avi | Unknown | PPT AVI 5 - P. C. Chen - Zonatech | Open resource |
| FLTMODE5_avi_swbt_tecplot.avi | Unknown | PPT AVI 6 - P. C. Chen - Zonatech | Open resource |
| LM LaRC ASE WS 041712.pptx | Unknown | Body Freedom Flutter and the X56A - Jeff Baranek - Lockheed Martin (LM) | Open resource |
| NASA_ASE_Workshop_18Apr2012_Raney.pptx | Unknown | Sim Study of Impact of ASE on Flying Qualities of a High Speed Civil Transport (HSCT) (PPT) - Dave Raney - NASA Langley | Open resource |
| NASA_ASE_workshop_pdf.pdf | System ID of Flexible Aircraft - Per Ohme - German Aerospace Center (DLR) | Open resource | |
| NASA ASE WS1.pdf | Interaction Between ASE & Simulation (PDF) - Dr. David K. Schmidt - UCCS | Open resource | |
| NASA ASE WS1.ppt | Powerpoint | Interaction Between ASE & Simulation (PPT) - Dr. David K. Schmidt - UCCS | Open resource |
| NedLindsleyNIA 18Apr2012.pptx | Unknown | Stick-to-Stress Real-Time Simulator (PPT) - Dr Ned Lindsley - Air Force Research Laboratory (AFRL) | Open resource |
| TypLCO_M090_H5KFT_1g_tip3.25g_Pt52.avi | Unknown | PPT AVI 2 - Dr Ned Lindsley - AFRL | Open resource |
| TypLCO_M092_H2KFT_1g_tip5.2g_Pt82.avi | Unknown | PPT AVI 3 - Dr Ned Lindsley - AFRL | Open resource |
| withstore.avi | Unknown | PPT AVI 4 - Dr Ned Lindsley - AFRL | Open resource |
| Proton irradiation augments the reduction in tumor progression observed with advanced age | HTML | GeneLab Study Page | Open resource |
| Proton irradiation augments the reduction in tumor progression observed with advanced age | HTML | GeneLab Study Page | Open resource |