Pilot-scale simulators and metagenomic to understand the storage tank ecosystem (JAWWA)

Description

An abundance matrix (Table - 16S rRNA taxonomy.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a number of reads and percentage of all reads obtained for each individual sample. A table (Table - antibiotic resistance genes.xlsx) contains rows as antibiotic resistance genes (AMR), columns as AMR gene symbol, AMR gene name, AMR type, AMR subtype, AMR class, and AMR subclass at each tank. A table (Table - metabolic pathways relative abundance.xlsx) contains rows as metabolic pathways, columns as samples, and entries representing the relative abundance of each pathway. A table (Table - samples.xlsx) with description of storage tank and their locations.

Resources

Name Format Description Link
53 Table%20-%20samples.xlsx https://pasteur.epa.gov/uploads/10.23719/1529128/Table%20-%20samples.xlsx
53 Table%20-%20antibiotic%20resistance%20genes.xlsx https://pasteur.epa.gov/uploads/10.23719/1529128/Table%20-%20antibiotic%20resistance%20genes.xlsx
53 Table%20-%20metabolic%20pathways%20relative%20abundance.xlsx https://pasteur.epa.gov/uploads/10.23719/1529128/Table%20-%20metabolic%20pathways%20relative%20abundance.xlsx
53 Table%20-%2016S%20rRNA%20taxonomy.xlsx https://pasteur.epa.gov/uploads/10.23719/1529128/Table%20-%2016S%20rRNA%20taxonomy.xlsx

Tags

  • storage-tanks
  • drinking-water-distribution-systems
  • microbial-communities

Topics

Categories