Pilot-scale simulators and metagenomic to understand the storage tank ecosystem (JAWWA)

Description

An abundance matrix (Table - 16S rRNA taxonomy.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a number of reads and percentage of all reads obtained for each individual sample.

A table (Table - antibiotic resistance genes.xlsx) contains rows as antibiotic resistance genes (AMR), columns as AMR gene symbol, AMR gene name, AMR type, AMR subtype, AMR class, and AMR subclass at each tank.

A table (Table - metabolic pathways relative abundance.xlsx) contains rows as metabolic pathways, columns as samples, and entries representing the relative abundance of each pathway.

A table (Table - samples.xlsx) with description of storage tank and their locations.

Resources

Name Format Description Link
Table - 16S rRNA taxonomy.xlsx XLS Table%20-%2016S%20rRNA%20taxonomy.xlsx Open resource
Table - antibiotic resistance genes.xlsx XLS Table%20-%20antibiotic%20resistance%20genes.xlsx Open resource
Table - metabolic pathways relative abundance.xlsx XLS Table%20-%20metabolic%20pathways%20relative%20abundance.xlsx Open resource
Table - samples.xlsx XLS Table%20-%20samples.xlsx Open resource

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