Organophosphate pesticide manuscript dataset

Description

Dataset investigating concordance between short-term transcriptomic points-of-departure and chronic points-of departure for three organophosphate pesticides across mouse and fathead minnow. Portions of this dataset are inaccessible because: The data files are too large. They can be accessed through the following means: Raw FASTQ files and raw and normalized read count matrices for the mouse liver study were submitted to the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus database (accession GSE240853). Raw FASTQ files for the fathead minnow larva study were submitted to the NCBI Sequence Read Archive (submission: SUB13852035). Format: FASTQ files from RNA-sequencing. This dataset is associated with the following publication: Martin, R., M. Hazemi, K. Flynn, D. Villeneuve, and L. Wehmas. Short-Term Transcriptomic Points of Departure Are Consistent with Chronic Points of Departure for Three Organophosphate Pesticides across Mouse and Fathead Minnow. Toxics. MDPI, Basel, SWITZERLAND, 11(10): 820, (2023).

Resources

Name Format Description Link
53 20230927_Fig_5.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/20230927_Fig_5.xlsx
53 20230927_Fig_4.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/20230927_Fig_4.xlsx
53 20230927_Fig_3.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/20230927_Fig_3.xlsx
53 20230828_BMDExpress_mouse_liver.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/20230828_BMDExpress_mouse_liver.xlsx
53 20230927_Supplemental_Tables.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/20230927_Supplemental_Tables.xlsx
53 20230927_Fig_2.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/20230927_Fig_2.xlsx
53 20230828_BMDExpress_fathead_minnow_larvae.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/20230828_BMDExpress_fathead_minnow_larvae.xlsx
53 FHM%20homologs%20conversion%20to%20HS%20MM%20and%20ZF.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/FHM%20homologs%20conversion%20to%20HS%20MM%20and%20ZF.xlsx
53 20230927_Supplemental_Fig_2.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/20230927_Supplemental_Fig_2.xlsx
53 20230927_Supplemental_Fig_1.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/20230927_Supplemental_Fig_1.xlsx
53 Supplemental%20Fig%201_Network%20categories.xlsx https://pasteur.epa.gov/uploads/10.23719/1529449/Supplemental%20Fig%201_Network%20categories.xlsx

Tags

  • fathead-minnow
  • methidathion
  • transcriptomics
  • organophosphate-pesticides
  • parathion
  • mouse
  • benchmark-dose-response
  • fenthion

Topics

Categories