Multipad Agarose Plate (MAP): A Rapid and High-Throughput Approach for Antibiotic Susceptibility Testing
Description
The datasets used for the Multipad Agarose Plate (MAP) paper. Each experiment was labelled with BE followed by a number. The file BE_condition_map.json describes what was placed on each pad for the experiments. Attached here are JSON files with Pandas data frames that contain all segmentation information, along with debug videos showing how the segmentation aligns with the images. Contact us for access to the raw data. Datasets used for validation experiments: Leakage test: BE100, BE102 Agarose concentration: BE103 Illumination wavelength verification: BE138 Seeding density verification: BE162 Datasets used for AST: Chloramphenicol and Rifampicin: BE140, BE141, BE142, BE144, BE145 Vancomycin, Ampicillin, Kanamycin: BE148, BE149 Ciprofloxacin, Tetracycline, Carbenicillin, Mecillinam: BE150, BE151 Broth microdilution data used for AST validation: BE139, BE143, BE160 Some datasets also include data that was discarded.
Resources
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Description |
Link |
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0 |
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http://data.europa.eu/88u/dataset/oai-zenodo-org-8113886 |
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0 |
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http://data.europa.eu/88u/dataset/oai-zenodo-org-8113886 |
Tags
- microscopy
- agar-pad
- map
- bacteria-imaging