Dataset - Papyrus - A large scale curated dataset aimed at bioactivity predictions

Description

Fixed version of Papyrus++ 05.6: - In the previous 05.6 version data was incorrectly duplicated based on assay type. This resulted in unintended data augmentation. - In this fixed 05.6 version the duplicates have been eliminated, now reporting the correct amount of data per assay type. This repository contains version 05.6 of the Papyrus dataset, an aggregated dataset of small molecule bioactivities, as described in the article "Papyrus - A large scale curated dataset aimed at bioactivity predictions" doi.org/10.1186/s13321-022-00672-x. Changes compared to version 05.5 - applied small molecule filter that filters out compounds with a MW < 200 or > 800, heavy metal containing compounds and mixtures - include TID column which contains information on the original protein identifier

Resources

Name Format Description Link
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775
0 http://data.europa.eu/88u/dataset/oai-zenodo-org-7821775

Tags

  • papyrus
  • bioactivity
  • proteochemometrics
  • curated-dataset
  • cheminformatics
  • machine-learning

Topics

Categories