Dataset and Data analysis "Multimodal vibrational studies of drug uptake in vitro: Is the whole greater than the sum of their parts?"
Description
Data Analysis for the publication 10.1002/jbio.202000264. It is divided in three different folders describing three different part of the data analysis: A. DATA TREATMENT RAMAN (Folder 1) 1. Import data using the Import_Raman script. 2. Plot Spectra and integrate DOX band Figure 1A Figure 1B 3. PCA Figure 1D Figure 1C SM 1 4. PLS Figure 1F Figure 1E B. ANALYSIS OF IR DATA AND MULTIMODAL IR-RAMAN OF DOX UPTAKE (Folder 2) 1 Load Data IR 2 Exploratory Analysis IR Figure 2A 3 PCA SM 2 4. Partial Least Squares vs time Figure 2C Figure 2B 5. Partial Least Squares vs Raman Signal Figure 2E Figure 2D 6. Make Averages and clean up Data for DATA Fusion IR Raman 7. 2DCORR Figure 3B 8. MCR_ALS WITH DATA FUSION Fitting of the concentration of Raman using the method in [9]. MCR-ALS Figures 4 A, B and C C. SIMULATION (Folder 3) 1. Load Raman DATA 2. Simulate Raman DAta 3. Load and simulate IR Data 4. 2D corr Figure 3A . Each folder contains a .mlx with the data analysis performed. Figures numbering corresponds to the one found in the article.
Resources
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http://data.europa.eu/88u/dataset/oai-zenodo-org-3784974 |
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http://data.europa.eu/88u/dataset/oai-zenodo-org-3784974 |
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http://data.europa.eu/88u/dataset/oai-zenodo-org-3784974 |
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http://data.europa.eu/88u/dataset/oai-zenodo-org-3784974 |
Tags
- multimodal-imaging
- raman
- matlab
- clinical-spectroscopy
- infrared
- spectroscopy