NCCOS Assessment: Fertilization cross results examining genetic relatedness impact on successful reproduction in three species of reef building corals in the Florida Reef Tract in 2019 and 2022 (NCEI Accession 0289357)

Description

Acropora cervicornis, A. palmata and Orbicella faveolata are important reef-building coral species in the Florida Reef Tract (FRT). These species have experienced alarming declines throughout the FRT, resulting in an increased risk of inbreeding depression and susceptibility to decreased fitness in surviving colonies. Acropora cervicornis, A. palmata and O. faveolata are broadcast spawners, introducing genetic diversity through sexual recombination of gametes during annual spawning events. Successful reproduction during this time is critical for curbing the deleterious effects of inbreeding depression, and in successfully restoring wild colonies to self-sustaining levels of genetic diversity. A critical step in the reproductive cycle of these species is the success of gamete fertilization following mass spawning events. Several abiotic causes of gametic incompatibilities have been reliably observed in these species, and incompatibility between certain genotypes has been shown to occur. This dataset represents the collection of gametes from three coral species following nine spawning events in the Florida Keys during two spawning years (2019 and 2022), reciprocal fertilization trials with gametes from each parent and determined fertilization success for each cross. Additionally, tissue fragments were collected from each A. cervicornis parent, DNA was isolated from the tissue and single nucleotide polymorphism analyses were performed using the Axiom Coral-Algae Genotyping array (Axiom AcropSNP, ThermoFisher Scientific). This data package contains images of coral eggs post fertilization trial and the results in spreadsheet format. The raw A. cervicornis single nucleotide polymorphism (SNP) data are also provided.

Resources

Name Format Description Link
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.25921/snwd-4v72
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/289357
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/289357
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0223/0289357/
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0 journal article https://doi.org/10.1007/s00338-017-1651-0
0 journal article https://doi.org/10.1002/eap.1978
0 journal article https://doi.org/10.1371/journal.pone.0030486
0 journal article https://doi.org/10.2307/1542017
0 journal article https://doi.org/10.1534/g3.119.400125
27 Navigate directly to the URL for data access and direct download. https://ggplot2.tidyverse.org
0 Data processing software https://github.com/tidyverse/dplyr
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0 journal article https://doi.org/10.1086/519795
0 journal article https://doi.org/10.1186/s13742-015-0047-8
0 journal article https://doi.org/10.1093/bioinformatics/btq559
0 journal article https://doi.org/10.1111/j.1755-0998.2010.02885.x
0 Research Thesis https://repository.library.cofc.edu/handle/123456789/5537
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/289357
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0223/0289357/
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0 Institution web page https://coastalscience.noaa.gov/
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0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
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0 journal article https://doi.org/10.1007/s00338-017-1651-0
0 journal article https://doi.org/10.1002/eap.1978
0 journal article https://doi.org/10.1371/journal.pone.0030486
0 journal article https://doi.org/10.2307/1542017
0 journal article https://doi.org/10.1534/g3.119.400125
27 Navigate directly to the URL for data access and direct download. https://ggplot2.tidyverse.org
0 Data processing software https://github.com/tidyverse/dplyr
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0 journal article https://doi.org/10.1086/519795
0 journal article https://doi.org/10.1186/s13742-015-0047-8
0 journal article https://doi.org/10.1093/bioinformatics/btq559
0 journal article https://doi.org/10.1111/j.1755-0998.2010.02885.x
0 Research Thesis https://repository.library.cofc.edu/handle/123456789/5537
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.25921/snwd-4v72
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/289357
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/289357
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0223/0289357/
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0 journal article https://doi.org/10.1007/s00338-017-1651-0
0 journal article https://doi.org/10.1002/eap.1978
0 journal article https://doi.org/10.1371/journal.pone.0030486
0 journal article https://doi.org/10.2307/1542017
0 journal article https://doi.org/10.1534/g3.119.400125
27 Navigate directly to the URL for data access and direct download. https://ggplot2.tidyverse.org
0 Data processing software https://github.com/tidyverse/dplyr
0 Data processing software https://CRAN.R-project.org/package=ggpubr
0 journal article https://doi.org/10.1086/519795
0 journal article https://doi.org/10.1186/s13742-015-0047-8
0 journal article https://doi.org/10.1093/bioinformatics/btq559
0 journal article https://doi.org/10.1111/j.1755-0998.2010.02885.x
0 Research Thesis https://repository.library.cofc.edu/handle/123456789/5537
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.25921/snwd-4v72
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/289357
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://www.sefsc.noaa.gov
0 Institution web page https://coastalscience.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.25921/snwd-4v72
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/289357
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/289357
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0223/0289357/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://www.nps.gov
0 Institution web page https://www.sefsc.noaa.gov
0 Institution web page http://www.keysmarinelab.org/
0 Institution web page http://www.cofc.edu/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://www.nps.gov
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://www.sefsc.noaa.gov
0 Institution web page https://coastalscience.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
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0 journal article https://doi.org/10.1007/s00338-017-1651-0
0 journal article https://doi.org/10.1002/eap.1978
0 journal article https://doi.org/10.1371/journal.pone.0030486
0 journal article https://doi.org/10.2307/1542017
0 journal article https://doi.org/10.1534/g3.119.400125
27 Navigate directly to the URL for data access and direct download. https://ggplot2.tidyverse.org
0 Data processing software https://github.com/tidyverse/dplyr
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0 journal article https://doi.org/10.1093/bioinformatics/btq559
0 journal article https://doi.org/10.1111/j.1755-0998.2010.02885.x
0 Research Thesis https://repository.library.cofc.edu/handle/123456789/5537
0 Institution web page https://www.sefsc.noaa.gov
0 Institution web page http://www.keysmarinelab.org/
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0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.25921/snwd-4v72
0 Data processing software https://github.com/tidyverse/dplyr
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/289357
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://www.nps.gov
0 Institution web page http://www.rsmas.miami.edu
0 Institution web page http://www.keysmarinelab.org/
0 Institution web page http://www.cofc.edu/
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0 Institution web page https://www.nps.gov
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0 Institution web page https://coastalscience.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
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0 journal article https://doi.org/10.1007/s00338-017-1651-0
0 journal article https://doi.org/10.1002/eap.1978
0 journal article https://doi.org/10.1371/journal.pone.0030486
0 journal article https://doi.org/10.2307/1542017
0 journal article https://doi.org/10.1534/g3.119.400125
27 Navigate directly to the URL for data access and direct download. https://ggplot2.tidyverse.org
0 journal article https://doi.org/10.1086/519795
0 journal article https://doi.org/10.1186/s13742-015-0047-8
0 journal article https://doi.org/10.1093/bioinformatics/btq559
0 journal article https://doi.org/10.1111/j.1755-0998.2010.02885.x
0 Research Thesis https://repository.library.cofc.edu/handle/123456789/5537
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/289357
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0223/0289357/
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Data processing software https://CRAN.R-project.org/package=ggpubr
0 Data processing software https://github.com/tidyverse/dplyr
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.25921/snwd-4v72
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/289357
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/289357
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0223/0289357/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://www.nps.gov
0 Institution web page http://www.rsmas.miami.edu
0 Institution web page http://www.keysmarinelab.org/
0 Institution web page http://www.cofc.edu/
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://www.nps.gov
0 Institution web page https://coastalscience.noaa.gov/
0 Institution web page https://www.sefsc.noaa.gov
0 Institution web page https://coastalscience.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
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0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 journal article https://doi.org/10.1007/s00338-017-1651-0
0 journal article https://doi.org/10.1002/eap.1978
0 journal article https://doi.org/10.1371/journal.pone.0030486
0 journal article https://doi.org/10.2307/1542017
0 journal article https://doi.org/10.1534/g3.119.400125
27 Navigate directly to the URL for data access and direct download. https://ggplot2.tidyverse.org
0 Data processing software https://CRAN.R-project.org/package=ggpubr
0 journal article https://doi.org/10.1086/519795
0 journal article https://doi.org/10.1186/s13742-015-0047-8
0 journal article https://doi.org/10.1093/bioinformatics/btq559
0 journal article https://doi.org/10.1111/j.1755-0998.2010.02885.x
0 Research Thesis https://repository.library.cofc.edu/handle/123456789/5537

Tags

  • coastal change
  • single nucleotide polymorphism (snp) data of acropora cervicornis
  • florida reef tract
  • united states of america
  • genetic data sets
  • corals
  • orbicella faveolata
  • genotyping
  • biosphere
  • tavernier (24n080w0006)
  • percent coral fertilization
  • esa listed species
  • w29gp1
  • monroe county
  • waterbodies
  • reproduction
  • sexual reproduction
  • 31230
  • oceanography
  • atlantic ocean
  • earth science
  • microscope images
  • acropora palmata
  • larvae
  • upper florida keys
  • acropora cervicornis
  • visual images
  • florida
  • u.s. states and territories
  • ocean basin
  • restoration
  • key largo (25n080w0010)
  • laboratory experiment
  • zoology
  • genetic relatedness: does it matter for successful coral sexual reproduction?
  • north atlantic ocean
  • country/territory
  • axiom coral-algae genotyping array

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Categories