National Coral Reef Monitoring Program: Benthic cover derived from analysis of images collected during stratified random surveys (StRS) of the Hawaiian Archipelago

Description

The benthic cover data in this collection result from the analysis of images produced by benthic photo-quadrat surveys. These surveys were conducted along transects at stratified random sites across the Hawaiian Archipelago as a part of the ongoing National Coral Reef Monitoring Program (NCRMP). Benthic cover data and the associated images are both included in this collection. A stratified random sampling (StRS) design was employed to survey the coral reef ecosystems throughout the region. The survey domain encompassed the majority of the mapped area of reef and hard bottom habitats in the 0-30 m depth range. The stratification scheme included island, reef zone, and depth in all regions, as well as habitat structure type in the Main Hawaiian Islands. Sampling effort was allocated based on strata area and sites were randomly assigned within strata. Sites were surveyed using photo-quadrats along transects. The imagery were then analyzed to produce estimates of relative abundance (percent cover), frequency of occurrence, benthic community taxonomic composition, and relative generic richness. Benthic habitat imagery were quantitatively analyzed using Coral Point Count with Excel extensions (CPCe; Kohler and Gill, 2006) software from 2010 to 2014 and a web-based annotation tool called CoralNet (Beijbom et al. 2015) starting in 2015. In general, images were analyzed to produce three functional group levels of benthic cover: Tier 1 (e.g., hard coral, soft coral, macroalgae, turf algae, etc.), Tier 2 (e.g., Hard Coral = massive, branching, foliose, encrusting, etc.; Macroalgae = upright macroalgae, encrusting macroalgae, bluegreen macroalgae, and Halimeda, etc.), and Tier 3 (e.g., Hard Coral = Astreopora sp, Favia sp, Pocillopora, etc.; Macroalgae = Caulerpa sp, Dictyosphaeria sp, Padina sp, etc.).

Resources

Name Format Description Link
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
21 ERDDAP acts as a middleman between you and various remote data servers. ERDDAP offers an easy-to-use, consistent way to request data: via the OPeNDAP standard. Many datasets can also be accessed via ERDDAP's Web Map Service (WMS). ERDDAP returns data in the common file format of your choice. ERDDAP offers all data as .html table, ESRI .asc and .csv, Google Earth .kml, OPeNDAP binary, .mat, .nc, ODV .txt, .csv, .tsv, .json, and .xhtml. https://www.ncei.noaa.gov/erddap/tabledap/CRCP_Benthic_Cover_Hawaii.html
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.7289/v5js9nr4
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 NCEI Documents only accession https://www.ncei.noaa.gov/archive/accession/0157633
0 Institution web page https://coralreef.noaa.gov
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36152
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36155
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Search for data granules belonging to this collection (a granule is the smallest aggregation of data that can be independently described and retrieved). https://www.ncei.noaa.gov/metadata/granule/geoportal/?from=0&size=10&esdsl=%7B%22query%22%3A%7B%22bool%22%3A%7B%22must%22%3A%5B%7B%22query_string%22%3A%7B%22analyze_wildcard%22%3Atrue%2C%22query%22%3A%22fileid%3ANCRMP-StRS-Images-HI.*%22%7D%7D%5D%7D%7D%7D#searchPanel
0 O. Beijbom, P. J. Edmunds, C. Roelfsema, J. Smith, D. I. Kline, B. Neal, M. J. Dunlap, V. Moriarty, T-Y. Fan, C-J. Tan, S. Chan, T. Treibitz, A. Gamst, B. G. Mitchell, D. Kriegman. "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation". PLOS One, July 2015. https://doi.org/10.1371/journal.pone.0130312
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Kohler, K.E. and S.M. Gill, 2006. Coral Point Count with Excel extensions (CPCe): A Visual Basic program for the determination of coral and substrate coverage using random point count methodology. Computers and Geosciences, Vol. 32, No. 9, pp. 1259-1269, https://doi.org/10.1016/j.cageo.2005.11.009. https://doi.org/10.1016/j.cageo.2005.11.009
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.7289/v5js9nr4
0 Search for data granules belonging to this collection (a granule is the smallest aggregation of data that can be independently described and retrieved). https://www.ncei.noaa.gov/metadata/granule/geoportal/?from=0&size=10&esdsl=%7B%22query%22%3A%7B%22bool%22%3A%7B%22must%22%3A%5B%7B%22query_string%22%3A%7B%22analyze_wildcard%22%3Atrue%2C%22query%22%3A%22fileid%3ANCRMP-StRS-Images-HI.*%22%7D%7D%5D%7D%7D%7D#searchPanel
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.soest.hawaii.edu/cimar/
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 NCEI Documents only accession https://www.ncei.noaa.gov/archive/accession/0157633
0 Institution web page https://coralreef.noaa.gov
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36152
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36155
0 O. Beijbom, P. J. Edmunds, C. Roelfsema, J. Smith, D. I. Kline, B. Neal, M. J. Dunlap, V. Moriarty, T-Y. Fan, C-J. Tan, S. Chan, T. Treibitz, A. Gamst, B. G. Mitchell, D. Kriegman. "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation". PLOS One, July 2015. https://doi.org/10.1371/journal.pone.0130312
0 related journal article https://doi.org/10.1016/j.cageo.2005.11.009
21 ERDDAP acts as a middleman between you and various remote data servers. ERDDAP offers an easy-to-use, consistent way to request data: via the OPeNDAP standard. Many datasets can also be accessed via ERDDAP's Web Map Service (WMS). ERDDAP returns data in the common file format of your choice. ERDDAP offers all data as .html table, ESRI .asc and .csv, Google Earth .kml, OPeNDAP binary, .mat, .nc, ODV .txt, .csv, .tsv, .json, and .xhtml. https://www.ncei.noaa.gov/erddap/tabledap/CRCP_Benthic_Cover_Hawaii.html
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Search for data granules belonging to this collection (a granule is the smallest aggregation of data that can be independently described and retrieved). https://www.ncei.noaa.gov/metadata/granule/geoportal/?from=0&size=10&esdsl=%7B%22query%22%3A%7B%22bool%22%3A%7B%22must%22%3A%5B%7B%22query_string%22%3A%7B%22analyze_wildcard%22%3Atrue%2C%22query%22%3A%22fileid%3ANCRMP-StRS-Images-HI.*%22%7D%7D%5D%7D%7D%7D#searchPanel
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.soest.hawaii.edu/cimar/
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 NCEI Documents only accession https://www.ncei.noaa.gov/archive/accession/0157633
0 Institution web page https://coralreef.noaa.gov
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36152
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36155
0 O. Beijbom, P. J. Edmunds, C. Roelfsema, J. Smith, D. I. Kline, B. Neal, M. J. Dunlap, V. Moriarty, T-Y. Fan, C-J. Tan, S. Chan, T. Treibitz, A. Gamst, B. G. Mitchell, D. Kriegman. "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation". PLOS One, July 2015. https://doi.org/10.1371/journal.pone.0130312
0 related journal article https://doi.org/10.1016/j.cageo.2005.11.009
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.7289/v5js9nr4
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
21 ERDDAP acts as a middleman between you and various remote data servers. ERDDAP offers an easy-to-use, consistent way to request data: via the OPeNDAP standard. Many datasets can also be accessed via ERDDAP's Web Map Service (WMS). ERDDAP returns data in the common file format of your choice. ERDDAP offers all data as .html table, ESRI .asc and .csv, Google Earth .kml, OPeNDAP binary, .mat, .nc, ODV .txt, .csv, .tsv, .json, and .xhtml. https://www.ncei.noaa.gov/erddap/tabledap/CRCP_Benthic_Cover_Hawaii.html
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Institution web page http://www.pifsc.noaa.gov/cred
21 ERDDAP acts as a middleman between you and various remote data servers. ERDDAP offers an easy-to-use, consistent way to request data: via the OPeNDAP standard. Many datasets can also be accessed via ERDDAP's Web Map Service (WMS). ERDDAP returns data in the common file format of your choice. ERDDAP offers all data as .html table, ESRI .asc and .csv, Google Earth .kml, OPeNDAP binary, .mat, .nc, ODV .txt, .csv, .tsv, .json, and .xhtml. https://www.ncei.noaa.gov/erddap/tabledap/CRCP_Benthic_Cover_Hawaii.html
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.7289/v5js9nr4
0 Search for data granules belonging to this collection (a granule is the smallest aggregation of data that can be independently described and retrieved). https://www.ncei.noaa.gov/metadata/granule/geoportal/?from=0&size=10&esdsl=%7B%22query%22%3A%7B%22bool%22%3A%7B%22must%22%3A%5B%7B%22query_string%22%3A%7B%22analyze_wildcard%22%3Atrue%2C%22query%22%3A%22fileid%3ANCRMP-StRS-Images-HI.*%22%7D%7D%5D%7D%7D%7D#searchPanel
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.soest.hawaii.edu/cimar/
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 NCEI Documents only accession https://www.ncei.noaa.gov/archive/accession/0157633
0 Institution web page https://coralreef.noaa.gov
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36152
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36155
0 O. Beijbom, P. J. Edmunds, C. Roelfsema, J. Smith, D. I. Kline, B. Neal, M. J. Dunlap, V. Moriarty, T-Y. Fan, C-J. Tan, S. Chan, T. Treibitz, A. Gamst, B. G. Mitchell, D. Kriegman. "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation". PLOS One, July 2015. https://doi.org/10.1371/journal.pone.0130312
0 related journal article https://doi.org/10.1016/j.cageo.2005.11.009

Tags

  • hawaiian islands (21n157w0027)
  • lanai island (20n156w0002)
  • crep
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  • coral cover
  • united states of america
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  • benthic habitat
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  • hard coral cover
  • 0mltl4
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  • hawaii island (19n155w0003)
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  • earth science
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  • northwestern hawaiian islands (28n178w0000)
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  • pacific reef and assessment monitoring program (pacific ramp - noaa/nmfs/cred)
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  • midway atoll (28n177w0001)
  • px2tha
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  • photoquadrat images (measured)
  • hawaii island
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  • lisianski island (25n173w0001)
  • 1mtglk
  • coral reef ecosystem program

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