National Coral Reef Monitoring Program: Benthic cover derived from analysis of images collected from climate stations across the Pacific Remote Island Areas

Description

The benthic cover data in this collection result from analyzing the images produced from ongoing National Coral Reef Monitoring Program (NCRMP) benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and Climate Change team across the Pacific Remote Island Areas. Benthic habitat imagery were quantitatively analyzed using Coral Point Count with Excel extensions (CPCe; Kohler and Gill, 2006) software from 2010-2014 and a web-based annotation tool called CoralNet (Beijbom et al. 2015) from 2015 to present. In general, images are analyzed to produce three functional group levels of benthic cover: Tier 1 (e.g., hard coral, soft coral, macroalgae, turf algae, etc.), Tier 2 (e.g., Hard Coral = massive, branching, foliose, encrusting, etc.; Macroalgae = upright macroalgae, encrusting macroalgae, bluegreen macroalgae, and Halimeda, etc.), and Tier 3 (e.g., Hard Coral = Astreopora sp, Favia sp, Pocillopora, etc.; Macroalgae = Caulerpa sp, Dictyosphaeria sp, Padina sp, etc.). The imagery analyzed in order to produce the benthic cover data is also included in this collection.

Resources

Name Format Description Link
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Kohler, K.E. and S.M. Gill, 2006. Coral Point Count with Excel extensions (CPCe): A Visual Basic program for the determination of coral and substrate coverage using random point count methodology. Computers and Geosciences, Vol. 32, No. 9, pp. 1259-1269, https://doi.org/10.1016/j.cageo.2005.11.009. https://doi.org/10.1016/j.cageo.2005.11.009
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.7289/v54m92v0
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 NCEI Documents only accession https://www.ncei.noaa.gov/archive/accession/0157633
0 Institution web page https://coralreef.noaa.gov
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36145
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36148
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
21 ERDDAP acts as a middleman between you and various remote data servers. ERDDAP offers an easy-to-use, consistent way to request data: via the OPeNDAP standard. Many datasets can also be accessed via ERDDAP's Web Map Service (WMS). ERDDAP returns data in the common file format of your choice. ERDDAP offers all data as .html table, ESRI .asc and .csv, Google Earth .kml, OPeNDAP binary, .mat, .nc, ODV .txt, .csv, .tsv, .json, and .xhtml. https://www.ncei.noaa.gov/erddap/tabledap/CRCP_Benthic_Cover_Climate_Stations_Pacific.html
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 O. Beijbom, P. J. Edmunds, C. Roelfsema, J. Smith, D. I. Kline, B. Neal, M. J. Dunlap, V. Moriarty, T-Y. Fan, C-J. Tan, S. Chan, T. Treibitz, A. Gamst, B. G. Mitchell, D. Kriegman. "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation". PLOS One, July 2015. https://doi.org/10.1371/journal.pone.0130312
0 Search for data granules belonging to this collection (a granule is the smallest aggregation of data that can be independently described and retrieved). https://www.ncei.noaa.gov/metadata/granule/geoportal/?from=0&size=10&esdsl=%7B%22query%22%3A%7B%22bool%22%3A%7B%22must%22%3A%5B%7B%22query_string%22%3A%7B%22analyze_wildcard%22%3Atrue%2C%22query%22%3A%22fileid%3ANCRMP-Climate-Images-PRIA.*%22%7D%7D%5D%7D%7D%7D#searchPanel
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.7289/v54m92v0
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.soest.hawaii.edu/cimar/
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 NCEI Documents only accession https://www.ncei.noaa.gov/archive/accession/0157633
0 Institution web page https://coralreef.noaa.gov
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36145
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36148
0 related journal article https://doi.org/10.1016/j.cageo.2005.11.009
0 O. Beijbom, P. J. Edmunds, C. Roelfsema, J. Smith, D. I. Kline, B. Neal, M. J. Dunlap, V. Moriarty, T-Y. Fan, C-J. Tan, S. Chan, T. Treibitz, A. Gamst, B. G. Mitchell, D. Kriegman. "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation". PLOS One, July 2015. https://doi.org/10.1371/journal.pone.0130312
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Search for data granules belonging to this collection (a granule is the smallest aggregation of data that can be independently described and retrieved). https://www.ncei.noaa.gov/metadata/granule/geoportal/?from=0&size=10&esdsl=%7B%22query%22%3A%7B%22bool%22%3A%7B%22must%22%3A%5B%7B%22query_string%22%3A%7B%22analyze_wildcard%22%3Atrue%2C%22query%22%3A%22fileid%3ANCRMP-Climate-Images-PRIA.*%22%7D%7D%5D%7D%7D%7D#searchPanel
21 ERDDAP acts as a middleman between you and various remote data servers. ERDDAP offers an easy-to-use, consistent way to request data: via the OPeNDAP standard. Many datasets can also be accessed via ERDDAP's Web Map Service (WMS). ERDDAP returns data in the common file format of your choice. ERDDAP offers all data as .html table, ESRI .asc and .csv, Google Earth .kml, OPeNDAP binary, .mat, .nc, ODV .txt, .csv, .tsv, .json, and .xhtml. https://www.ncei.noaa.gov/erddap/tabledap/CRCP_Benthic_Cover_Climate_Stations_Pacific.html
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36148
0 related journal article https://doi.org/10.1016/j.cageo.2005.11.009
21 ERDDAP acts as a middleman between you and various remote data servers. ERDDAP offers an easy-to-use, consistent way to request data: via the OPeNDAP standard. Many datasets can also be accessed via ERDDAP's Web Map Service (WMS). ERDDAP returns data in the common file format of your choice. ERDDAP offers all data as .html table, ESRI .asc and .csv, Google Earth .kml, OPeNDAP binary, .mat, .nc, ODV .txt, .csv, .tsv, .json, and .xhtml. https://www.ncei.noaa.gov/erddap/tabledap/CRCP_Benthic_Cover_Climate_Stations_Pacific.html
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.7289/v54m92v0
0 Search for data granules belonging to this collection (a granule is the smallest aggregation of data that can be independently described and retrieved). https://www.ncei.noaa.gov/metadata/granule/geoportal/?from=0&size=10&esdsl=%7B%22query%22%3A%7B%22bool%22%3A%7B%22must%22%3A%5B%7B%22query_string%22%3A%7B%22analyze_wildcard%22%3Atrue%2C%22query%22%3A%22fileid%3ANCRMP-Climate-Images-PRIA.*%22%7D%7D%5D%7D%7D%7D#searchPanel
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.soest.hawaii.edu/cimar/
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 NCEI Documents only accession https://www.ncei.noaa.gov/archive/accession/0157633
0 Institution web page https://coralreef.noaa.gov
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36145
0 O. Beijbom, P. J. Edmunds, C. Roelfsema, J. Smith, D. I. Kline, B. Neal, M. J. Dunlap, V. Moriarty, T-Y. Fan, C-J. Tan, S. Chan, T. Treibitz, A. Gamst, B. G. Mitchell, D. Kriegman. "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation". PLOS One, July 2015. https://doi.org/10.1371/journal.pone.0130312
21 ERDDAP acts as a middleman between you and various remote data servers. ERDDAP offers an easy-to-use, consistent way to request data: via the OPeNDAP standard. Many datasets can also be accessed via ERDDAP's Web Map Service (WMS). ERDDAP returns data in the common file format of your choice. ERDDAP offers all data as .html table, ESRI .asc and .csv, Google Earth .kml, OPeNDAP binary, .mat, .nc, ODV .txt, .csv, .tsv, .json, and .xhtml. https://www.ncei.noaa.gov/erddap/tabledap/CRCP_Benthic_Cover_Climate_Stations_Pacific.html
0 Navigate directly to the URL for a descriptive web page with download links. https://doi.org/10.7289/v54m92v0
0 Search for data granules belonging to this collection (a granule is the smallest aggregation of data that can be independently described and retrieved). https://www.ncei.noaa.gov/metadata/granule/geoportal/?from=0&size=10&esdsl=%7B%22query%22%3A%7B%22bool%22%3A%7B%22must%22%3A%5B%7B%22query_string%22%3A%7B%22analyze_wildcard%22%3Atrue%2C%22query%22%3A%22fileid%3ANCRMP-Climate-Images-PRIA.*%22%7D%7D%5D%7D%7D%7D#searchPanel
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.soest.hawaii.edu/cimar/
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Institution web page http://www.pifsc.noaa.gov/cred
0 Institution web page https://www.pifsc.noaa.gov/ecosystem_sciences/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 NCEI Documents only accession https://www.ncei.noaa.gov/archive/accession/0157633
0 Institution web page https://coralreef.noaa.gov
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36145
0 InPort Metadata Record https://www.fisheries.noaa.gov/inport/item/36148
0 related journal article https://doi.org/10.1016/j.cageo.2005.11.009
0 O. Beijbom, P. J. Edmunds, C. Roelfsema, J. Smith, D. I. Kline, B. Neal, M. J. Dunlap, V. Moriarty, T-Y. Fan, C-J. Tan, S. Chan, T. Treibitz, A. Gamst, B. G. Mitchell, D. Kriegman. "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation". PLOS One, July 2015. https://doi.org/10.1371/journal.pone.0130312

Tags

  • tt2a76
  • kingman reef (06n162w0001)
  • crep
  • coral cover
  • 80m2pe
  • united states of america
  • pacific remote islands marine national monument
  • reef monitoring and assessment
  • johnston atoll (16n169w0001)
  • aquatic habitat
  • wake atoll
  • corals
  • 6n4188
  • tridacna
  • benthic habitat
  • coral reef ecosystem division
  • benthic
  • ocean chemistry
  • marine plants
  • baker island
  • pifsc
  • photograph analysis
  • in situ biological
  • jarvis island (00s160w0001)
  • biosphere
  • photographic analysis
  • pacific remote island areas
  • national coral reef monitoring program
  • palmyra atoll (05n162w0001)
  • oceans
  • algae
  • marine invertebrates
  • primn
  • hard coral cover
  • 7ff64r
  • numeric data sets
  • algal cover
  • hard coral cover live percentage
  • baseline studies
  • macroinvertebrates
  • oceanography
  • coralnet
  • sponges
  • baker island (00n176w0001)
  • quadrat monitoring
  • habitats
  • national coral reef monitoring program (ncrmp)
  • howland island
  • pacific islands fisheries science center
  • earth science
  • benthic biology
  • line islands
  • seagrass
  • triennial
  • vegetation
  • d3wbyy
  • climate change
  • crustose coralline algae
  • pria
  • marine biology
  • coral communities
  • cred
  • mollusks
  • howland island (00s176w0001)
  • encrusting macroalgae
  • visual images
  • microbiota
  • ywd3wb
  • benthos analysis
  • central pacific ocean
  • usa minor outlying islands
  • 743
  • blue-green algae
  • transect monitoring
  • reef habitat
  • coral reef ecology
  • ocean basin
  • ecosystem sciences division
  • coral
  • esd
  • coastal processes
  • johnston atoll
  • octocoral cover
  • cmapmh
  • zoology
  • coral reefs
  • pacific ocean
  • rapid assessment studies
  • c2md5f
  • country/territory
  • rugosity
  • belt transect
  • turf algae
  • wake atoll (19n167e0001)
  • coral reef ecosystem program
  • eb9bb6

Topics

Categories