Description
data sets included in this study:
Differential Expressed gene lists for nano Cu CuCl2 treated HepG2 cells through RNA sequencing.
Differential Expressed microRNA lists for nano Cu and CuCl2 treated HepG2 cells through small RNA sequencing.
Sequencing data was quantified using Partek annotation and the STAR-2.5.3a aligner, aligned to human genome hg19. Normalization and contrast were performed using DESeq2. MicroRNA expression was quantified with mirDeep2. Benjamini-Hochberg method for multi-testing correcton was included in DESeq2.
Resources
| Name | Format | Description | Link |
|---|---|---|---|
| CuCl2 miRNA lists.xlsx | XLS | CuCl2%20miRNA%20lists.xlsx | Open resource |
| DEG-0.05-result_Cu_10.xlsx | XLS | DEG-0.05-result_Cu_10.xlsx | Open resource |
| DEG-0.05-result_Cu_1_25.xlsx | XLS | DEG-0.05-result_Cu_1_25.xlsx | Open resource |
| DEG-0.05-result_Cu_2_5.xlsx | XLS | DEG-0.05-result_Cu_2_5.xlsx | Open resource |
| DEG-0.05-result_Cu_5.xlsx | XLS | DEG-0.05-result_Cu_5.xlsx | Open resource |
| DEG-0.05-result_CuCl2_0_25.xlsx | XLS | DEG-0.05-result_CuCl2_0_25.xlsx | Open resource |
| DEG-0.05-result_CuCl2_0_5.xlsx | XLS | DEG-0.05-result_CuCl2_0_5.xlsx | Open resource |
| DEG-0.05-result_CuCl2_1.xlsx | XLS | DEG-0.05-result_CuCl2_1.xlsx | Open resource |
| DEG-0.05-result_CuCl2_3.xlsx | XLS | DEG-0.05-result_CuCl2_3.xlsx | Open resource |
| nano Cu miRNA lists.xlsx | XLS | nano%20Cu%20miRNA%20lists.xlsx | Open resource |