Description
PS_GenBank.fasta file contain the sequences of the bacterial 16S rRNA-encoding gene for each representative sequence. The sequence containing four hypervariable regions was amplified using the primer set Eub-8f and 787.
PS_GenBank.xlsx file contains rows as sample and columns as entries representing the accession number (NCBI) deposited in GenBank for each representative sequence (i.e. unique sequences).
PS_OTU.fasta file contain the sequences of the bacterial 16S rRNA-encoding gene for each Operational Taxonomic Unit (OTU). The sequence containing four hypervariable regions was amplified using the primer set Eub-8f and 787.
This dataset is associated with the following publication:
Revetta , R., V. Gomez-Alvarez, T. Gerke, J. Santodomingo , and N. Ashbolt. CHANGES IN BACTERIAL COMPOSITION OF BIOFILM IN A METROPOLITAN DRINKING WATER DISTRIBUTION SYSTEM. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, USA, 121(1): 294-305, (2016).
Resources
| Name | Format | Description | Link |
|---|---|---|---|
| PS_GenBank.fasta.zip | ZIP | PS_GenBank.fasta.zip | Open resource |
| PS_GenBank.xlsx | XLS | PS_GenBank.xlsx | Open resource |
| PS_OTU.fasta.zip | ZIP | PS_OTU.fasta.zip | Open resource |