Spatial metatranscriptomics resolves host-bacteria-fungi interactomes, Source Data
Description
Source Data for a publication: Spatial metatranscriptomics resolves host-bacteria-fungi interactomes.
Includes the data sets to generate the results.
Contains five different experiment types:
- Pst bacterial infiltration experiment
- Enrichment experiment with different array types
- Comparison between SmT vs. Amp-seq
- Outdoor-grown leaf experiments
- Sterile leaf experiment
For each of the experiments are included (if generated, see the README file):
- Gene count matrices
- Microbial taxa count matrices
- Bright field images
- Alignment files (Spot files)
- Putative microbial reads and related probe information
- Data for enrichment analysis
- Fluorescent images and corresponding fluorescent values
Resources
| Name |
Format |
Description |
Link |
|
0 |
|
http://data.europa.eu/88u/dataset/https-doi-org-10-5281-zenodo-8308137 |
Tags
- microbe
- transcriptomics
- spatial-metatranscriptomics
- spatial-transcriptomics
- host-microbe-interactions