Description
Source Data for a publication: Spatial metatranscriptomics resolves host-bacteria-fungi interactomes.
Includes the data sets to generate the results.
Contains five different experiment types:
- Pst bacterial infiltration experiment
- Enrichment experiment with different array types - Comparison between SmT vs. Amp-seq
- Outdoor-grown leaf experiments
- Sterile leaf experiment
For each of the experiments are included (if generated, see the README file):
- Gene count matrices
- Microbial taxa count matrices
- Bright field images
- Alignment files (Spot files)
- Putative microbial reads and related probe information
- Data for enrichment analysis
- Fluorescent images and corresponding fluorescent values
Resources
| Name | Format | Description | Link |
|---|---|---|---|
| Landing page for the dataset | Unknown | Open resource |