Gene annotation of Linum trigynum
Description
The file contains the genes annotation of Linum trigynum genome.
The genome has been deposited to [ENA](https://www.ebi.ac.uk/ena/browser/home) with the accession id: GCA_964030455 (project PRJEB67577).
The genes annotation has been done with [TSEBRA](https://github.com/Gaius-Augustus/TSEBRA). The genes contained in the S-locus region has been manually annotated using [StringTie](https://ccb.jhu.edu/software/stringtie/) and [TransDecoder](https://github.com/TransDecoder/). The conversion from gtf to gff3 has been done with [AGAT](https://agat.readthedocs.io/en/latest/index.html).
It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087
Resources
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Description |
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0 |
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http://data.europa.eu/88u/dataset/https-doi-org-10-17044-scilifelab-24324382 |
Tags
- dataset
- evolutionary-ecology