Description
These stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium are intended as a standard resource of BED files for use in stratifying true positive, false positive, and false negative variant calls. These v2.0 stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium are intended as a standard resource of BED files for use in stratifying true positive, false positive, and false negative variant calls. v2.0 stratifications have been deprecated and replaced by v3.0 genome-stratifications.
Resources
| Name | Format | Description | Link |
|---|---|---|---|
| PDF File | create_GRCh37_cds_bed.pdf | Open resource | |
| Text File | Text | Open resource | |
| Web Resource | Binary | create_GRCh37_cds_bed.Rmd | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinrefseq_union_cds.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_refseq_cds.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-FunctionalRegions-README.txt | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_BadPromoters.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-FunctionalTechDifficult-README.txt | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc15_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc15to20_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc20to25_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc25to30_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc30to55_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc55to60_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc60to65_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc65to70_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc70to75_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc75to80_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc80to85_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gc85_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gclt25orgt65_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gclt30orgt55_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | seqtk_gc.sh | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-GCcontent-README.txt | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | genome_specific.sh | Open resource |
| Text File | Text | Open resource | |
| Web Resource | Binary | Open resource | |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_GIABv3.2.2_compoundhet_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_GIABv3.2.2_varswithin50bp.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_GIABv3.3.2_comphetindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_GIABv3.3.2_comphetsnp10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_GIABv3.3.2_complexandSVs.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_GIABv3.3.2_complexindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_GIABv3.3.2_RTG_PG_v3.3.2_SVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_GIABv3.3.2_RTG_PG_v3.3.2_SVs_notin_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_GIABv3.3.2_snpswithin10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_PacBio_MetaSV.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_PG2016-1.0_comphetindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_PG2016-1.0_comphetsnp10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_PG2016-1.0_complexindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_PG2016-1.0_snpswithin10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_RTG_37.7.3_comphetindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_RTG_37.7.3_comphetsnp10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_RTG_37.7.3_complexindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG001_RTG_37.7.3_snpswithin10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_expanded_150_Tier1plusTier2_v0.6.1.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv3.2.2_compoundhet_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv3.2.2_varswithin50bp.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv3.3.2_comphetindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv3.3.2_comphetsnp10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv3.3.2_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv3.3.2_complexandSVs.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv3.3.2_complexindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv3.3.2_notin_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv3.3.2_snpswithin10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_CNV_CCSandONT_elliptical_outlier.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_CNV_gt2assemblycontigs_ONTCanu_ONTFlye_CCSCanu.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_CNV_mrcanavarIllumina_CCShighcov_ONThighcov_intersection.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_CNVsandSVs.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_comphetindel10bp_slop50..bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_comphetsnp10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_complexandSVs.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_complexindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_inversions_slop25percent.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_notin_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_othercomplexwithin10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_GIABv4.1_snpswithin10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_HG003_HG004_allsvs.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG002_Tier1plusTier2_v0.6.1.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG003_GIABv3.3.2_comphetindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG003_GIABv3.3.2_comphetsnp10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG003_GIABv3.3.2_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG003_GIABv3.3.2_complexandSVs.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG003_GIABv3.3.2_complexindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG003_GIABv3.3.2_notin_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG003_GIABv3.3.2_snpswithin10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG004_GIABv3.3.2_comphetindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG004_GIABv3.3.2_comphetsnp10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG004_GIABv3.3.2_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG004_GIABv3.3.2_complexandSVs.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG004_GIABv3.3.2_complexindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG004_GIABv3.3.2_notin_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG004_GIABv3.3.2_snpswithin10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG005_GIABv3.3.2_comphetindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG005_GIABv3.3.2_comphetsnp10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG005_GIABv3.3.2_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG005_GIABv3.3.2_complexandSVs.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG005_GIABv3.3.2_complexindel10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG005_GIABv3.3.2_notin_complexandSVs_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG005_GIABv3.3.2_snpswithin10bp_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_HG005_HG006_HG007_MetaSV_allsvs.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | Merge_difficult_regions.sh | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-GenomeSpecific-README.txt | Open resource |
| Text File | Text | Open resource | |
| Web Resource | Python | findSimpleRegions_quad.py | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | FindSimpleRepeats_v2.sh | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_AllHomopolymers_gt6bp_imperfectgt10bp_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_AllTandemRepeats_201to10000bp_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_AllTandemRepeats_51to200bp_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_AllTandemRepeatsandHomopolymers_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_AllTandemRepeats_gt10000bp_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_AllTandemRepeats_gt100bp_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_AllTandemRepeats_lt51bp_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinAllHomopolymers_gt6bp_imperfectgt10bp_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinAllTandemRepeatsandHomopolymers_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_diTR_11to50_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_diTR_51to200_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_diTR_gt200_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_homopolymer_4to6_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_homopolymer_7to11_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_homopolymer_gt11_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_imperfecthomopolgt10_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_quadTR_20to50_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_quadTR_51to200_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_quadTR_gt200_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_triTR_15to50_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_triTR_51to200_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_SimpleRepeat_triTR_gt200_slop5.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-LowComplexity-README.txt | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_lowmappabilityall.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_nonunique_l100_m2_e1.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_nonunique_l250_m0_e0.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinlowmappabilityall.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | make_all_and_notin_beds.sh | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | run_GEM_mappability.sh | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | run_GEM_mappability_sort.sh | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-mappability-README.txt | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_allOtherDifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_contigs_lt500kb.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gaps_slop15kb.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | Binary | Open resource | |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_hg38_minimap2_asm20_N10_gt1contig_gt1kb.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_hg38_minimap2_asm20_N10_nocovgt1kb.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_hs37d5_decoy_alignments.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_L1H_gt500.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_MHC.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_missing_and_multiple_alignments_of_GRCh38.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_VDJ.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | Merge_difficult_regions.sh | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-OtherDifficult_README.txt | Open resource |
| Text File | Text | Open resource | |
| Web Resource | Binary | Open resource | |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_chainSelf.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_chainSelf_gt10kb.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | Binary | Open resource | |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_gt5segdups_gt10kb_gt99percidentity.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | Binary | Open resource | |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinchainSelf.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinchainSelf_gt10kb.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinsegdups.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinsegdups_gt10kb.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_segdups.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_segdups_gt10kb.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-SegDup-README.txt | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_alldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_alllowmapandsegdupregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinalldifficultregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh37_notinalllowmapandsegdupregions.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | Merge_difficult_regions.sh | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-Union-README.txt | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh37-stratification-md5-checksums.txt | Open resource |
| Text File | Text | Open resource | |
| Tab Separated Values File | TSV | v2.0-GRCh37-stratifications.tsv | Open resource |
| Text File | Text | Open resource | |
| PDF File | create_GRCh38_cds_bed.pdf | Open resource | |
| Text File | Text | Open resource | |
| Web Resource | Binary | create_GRCh38_cds_bed.Rmd | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh38_notinrefseq_cds.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh38_refseq_cds.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh38-FunctionalRegions-README.txt | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | format_bed_after_remap.sh | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh38_BadPromoters.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | trim_bed_to_three_fields.sh | Open resource |
| Text File | Text | Open resource | |
| Text File | Text | v2.0-GRCh38-FunctionalTechDifficult-README.txt | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh38_gc15_slop50.bed.gz | Open resource |
| Text File | Text | Open resource | |
| Web Resource | G-Zipped | GRCh38_gc15to20_slop50.bed.gz | Open resource |
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| Web Resource | G-Zipped | GRCh38_gc20to25_slop50.bed.gz | Open resource |
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| DOI Access for Genome In A Bottle - Genome Stratifications | Unknown | Open resource | |
| GIAB FTP Site | Unknown | NIH-NCBI hosted FTP site provided to facilitate user access. Files on the FTP site are subject to change whereas files on data.nist.gov archived version of the files. | Open resource |
| Code repository | Unknown | Version controlled repository with code used to generate the stratification files. | Open resource |