Description
This data set is composed of Tables, Figures, zip file containing the whole manuscript individual datasets.
This dataset is associated with the following publication:
Wehmas, L., C. Wood, B. Chorley, C. Yauk, G. Nelson, and S. Hester. Enhanced Quality Metrics for Assessing RNA Derived From Archival Formalin-Fixed Paraffin-Embedded Tissue Samples. TOXICOLOGICAL SCIENCES. Society of Toxicology, RESTON, VA, 170(2): 357-373, (2019).
Resources
| Name | Format | Description | Link |
|---|---|---|---|
| Enhancement of RNA from FFPE_v27.2_clean_20171115.docx | Doc | Enhancement%20of%20RNA%20from%20FFPE_v27.2_clean_20171115.docx | Open resource |
| Enhancement of RNA from FFPE_v27.2_marked_20171115.docx | Doc | Enhancement%20of%20RNA%20from%20FFPE_v27.2_marked_20171115.docx | Open resource |
| Table_1_DEG_overlap_20171024.xlsx | XLS | Table_1_DEG_overlap_20171024.xlsx | Open resource |
| Table_2_IPA_overlap_20170731.xlsx | XLS | Table_2_IPA_overlap_20170731.xlsx | Open resource |
| Table_S10_Canonical_pathways_ranked_20171031_rev.xlsx | XLS | Table_S10_Canonical_pathways_ranked_20171031_rev.xlsx | Open resource |
| Table_S11_Linear_regression_analysis_pathway_upstream_regulators_20171031.xlsx | XLS | Table_S11_Linear_regression_analysis_pathway_upstream_regulators_20171031.xlsx | Open resource |
| Table_S12_Upstream_regulator_rank_20171031.xlsx | XLS | Table_S12_Upstream_regulator_rank_20171031.xlsx | Open resource |
| Table_S13_Casual_network_analysis_20171031.xlsx | XLS | Table_S13_Casual_network_analysis_20171031.xlsx | Open resource |
| Table_S1_triplex_RT-qPCR_primers_20170829.xlsx | XLS | Table_S1_triplex_RT-qPCR_primers_20170829.xlsx | Open resource |
| Table_S2_Library_prep_fragmentation_times_20170731.xlsx | XLS | Table_S2_Library_prep_fragmentation_times_20170731.xlsx | Open resource |
| Table_S3_RNA_and_RNA_quality_20171031_clean.xlsx | XLS | Table_S3_RNA_and_RNA_quality_20171031_clean.xlsx | Open resource |
| Table_S4_Actb_amplicon_summary_20170731.xlsx | XLS | Table_S4_Actb_amplicon_summary_20170731.xlsx | Open resource |
| Table_S5_sequencing_quality_metrics_20171031_clean.xlsx | XLS | Table_S5_sequencing_quality_metrics_20171031_clean.xlsx | Open resource |
| Table_S6_total_and_unique_raw_gene_ct_summary_20171031.xlsx | XLS | Table_S6_total_and_unique_raw_gene_ct_summary_20171031.xlsx | Open resource |
| Table_S7_differentially_expressed_genes_20171031.xlsx | XLS | Table_S7_differentially_expressed_genes_20171031.xlsx | Open resource |
| Table_S8_overlapping_deg_lists_vs_fr_20171031.xlsx | XLS | Table_S8_overlapping_deg_lists_vs_fr_20171031.xlsx | Open resource |
| Table_S9_raw_normalized_biomarker_counts_20171031.xlsx | XLS | Table_S9_raw_normalized_biomarker_counts_20171031.xlsx | Open resource |
| Wehmas_to_Linda_Adams Fig&text&tables.zip | ZIP | Wehmas_to_Linda_Adams%20Fig%26text%26tables.zip | Open resource |