EE2_FHM_larva_RNASeq_20210309a_GSE160535
Description
The data are maintained at the National Center for Biotechnology Information (NCBI) GEO depository https://www.ncbi.nlm.nih.gov/geo/ . There are three accession numbers (which can be entered at this site):
• GSE160535 - Development of omic biomarkers for Fathead minnow larva (Pimephales promelas) exposed to ethinyl estradiol
A superseries which links to the two separate data sets from the same experiment (below)
• GSE158857 - Development of omic biomarkers for Fathead minnow larva (Pimephales promelas) exposed to ethinyl estradiol [non-coding small RNA]
The non-coding small RNA dataset (includes microRNA and PIWI-RNA data and metadata
• GSE160520 - Development of omic biomarkers for Fathead minnow larva (Pimephales promelas) exposed to ethinyl estradiol [mRNA]
The mRNA data set including metadata.
This dataset is associated with the following publication:
Toth, G., J. Martinson, D. Bencic, D. Lattier, M. Kostich, and A. Biales. Development of omcis biomarkers for estrogen exposure using mRNA, miRNA and piRNAs. AQUATIC TOXICOLOGY. Elsevier Science Ltd, New York, NY, USA, 235: 105807, (2021).
Resources
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https://www.ncbi.nlm.nih.gov/geo/ |
Tags
- fathead-minnow
- estrogen
- non-coding-rna
- transcriptome