Drinking Water Microbiome OTU Abundance Data Set
Description
An abundance matrix (BM_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained for each individual sample.
This dataset is associated with the following publication:
Gomez-Alvarez, V., and R. Revetta. Monitoring of Nitrification in Chloraminated Drinking Water Distribution Systems With Microbiome Bioindicators Using Supervised Machine Learning. Frontiers in Microbiology. Frontiers, Lausanne, SWITZERLAND, 11: 2254-2267, (2020).
Resources
| Name |
Format |
Description |
Link |
|
53 |
BM_OTU.xlsx |
https://pasteur.epa.gov/uploads/10.23719/1369388/BM_OTU.xlsx |
Tags
- microbiome
- otu
- drinking-water
- 16s-rrna
- nitrification
- relative-abundance
- machine-learning