Description
An inshore-to-offshore gradient in reef coral resilience to high temperatures exists in the Upper Florida Keys, with massive corals of the highly turbid nearshore reefs demonstrating higher capacity to resist summer bleaching than offshore conspecifics. After corroborating this trend with diverse Orbicella faveolata genotypes exposed to elevated temperatures in the laboratory, a proteomic analysis was taken with a subset of 20 samples via iTRAQ labeling followed by nano-liquid chromatography+mass spectrometry; 46 host coral and 40 Symbiodiniaceae dinoflagellate proteins passed all stringent quality control criteria, and the partial proteomes of biopsies of 1) healthy controls, 2) sub-lethally-stressed samples, and 3) actively bleaching corals differed significantly from one another. The proteomic data were then used to train predictive models of coral colony bleaching susceptibility, and both generalized multivariate regression and neural network models were capable of doing so with 100% accuracy. Successful future testing of the predictive power of these models in situ will establish the capacity to monitor coral health on a proactive, pre-death timescale.
Resources
| Name | Format | Description | Link |
|---|---|---|---|
| FTP | Unknown | These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). | |
| FTP | Unknown | These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). | |
| FTP | Unknown | These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). | |
| FTP | Unknown | These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). | |
| FTP | Unknown | These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). | |
| FTP | Unknown | These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). | |
| Rosenstiel School of Marine, Atmospheric, and Earth Science Cooperative Institute for Marine and Atmospheric Studies (CIMAS) website | Unknown | Institution web page | Open resource |
| Rosenstiel School of Marine, Atmospheric, and Earth Science Cooperative Institute for Marine and Atmospheric Studies (CIMAS) website | Unknown | Institution web page | Open resource |
| Rosenstiel School of Marine, Atmospheric, and Earth Science Cooperative Institute for Marine and Atmospheric Studies (CIMAS) website | Unknown | Institution web page | Open resource |
| Rosenstiel School of Marine, Atmospheric, and Earth Science Cooperative Institute for Marine and Atmospheric Studies (CIMAS) website | Unknown | Institution web page | Open resource |
| Rosenstiel School of Marine, Atmospheric, and Earth Science Cooperative Institute for Marine and Atmospheric Studies (CIMAS) website | Unknown | Institution web page | Open resource |
| https://doi.org/10.25345/c55z0q | Unknown | Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI | Open resource |
| https://doi.org/10.25345/c55z0q | Unknown | Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI | Open resource |
| https://doi.org/10.25345/c55z0q | Unknown | Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI | Open resource |
| https://doi.org/10.25345/c55z0q | Unknown | Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI | Open resource |
| https://doi.org/10.25345/c55z0q | Unknown | Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI | Open resource |
| MassIVE accession MSV000086530 | Unknown | Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI | Open resource |
| GCMD Keyword Forum Page | Unknown | Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords | Open resource |
| GCMD Keyword Forum Page | Unknown | Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords | Open resource |
| GCMD Keyword Forum Page | Unknown | Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords | Open resource |
| GCMD Keyword Forum Page | Unknown | Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords | Open resource |
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| GCMD Keyword Forum Page | Unknown | Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords | Open resource |
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| GCMD Keyword Forum Page | Unknown | Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords | Open resource |
| GCMD Keyword Forum Page | Unknown | Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords | Open resource |
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| GCMD Keyword Forum Page | Unknown | Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 16. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords | Open resource |
| GCMD Keyword Forum Page | Unknown | Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords | Open resource |
| NOAA Atlantic Oceanographic and Meteorological Laboratory (AOML) website | Unknown | Institution web page | Open resource |
| NOAA Atlantic Oceanographic and Meteorological Laboratory website | Unknown | Institution web page | Open resource |
| NOAA Atlantic Oceanographic and Meteorological Laboratory (AOML) website | Unknown | Institution web page | Open resource |
| NOAA Atlantic Oceanographic and Meteorological Laboratory (AOML) website | Unknown | Institution web page | Open resource |
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| NOAA Atlantic Oceanographic and Meteorological Laboratory (AOML) website | Unknown | Institution web page | Open resource |
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| https://www.ncei.noaa.gov/archive/accession/0227133 | Unknown | Related samples and analysis | Open resource |
| https://www.ncei.noaa.gov/archive/accession/0227133 | Unknown | Related samples and analysis | Open resource |
| https://www.ncei.noaa.gov/archive/accession/0227133 | Unknown | Related samples and analysis | Open resource |
| https://www.ncei.noaa.gov/archive/accession/0227133 | Unknown | Related samples and analysis | Open resource |
| https://www.ncei.noaa.gov/archive/accession/0227133 | Unknown | Related samples and analysis | Open resource |
| https://www.ncei.noaa.gov/archive/accession/0227133 | Unknown | Related samples and analysis | Open resource |
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Tags
- 8ehutj
- atlantic ocean
- biosphere
- bleaching
- bleaching thermal stress
- cheeca rocks (24n080w0009)
- conch reef (24n080w0011)
- coral diseases
- corals
- country/territory
- earth science
- florida
- florida reef tract
- gbn1
- genetic data sets
- little conch
- molecular genetic analysis
- monroe county
- north atlantic ocean
- ocean basin
- oceanography
- omics-nrdd18978
- orbicella faveolata
- photic zone corals
- predictive model
- protein concentration
- protein sequences
- proteomic analysis
- q exactive mass spectrometer
- reef monitoring and assessment
- scleractinia (stony corals)
- the rocks
- united states of america
- upper florida keys
- zoology