Differential proteomic analysis of the massive star coral Orbicella faveolata exposed to experimentally elevated temperatures (NCEI Accession 0242879)

Description

An inshore-to-offshore gradient in reef coral resilience to high temperatures exists in the Upper Florida Keys, with massive corals of the highly turbid nearshore reefs demonstrating higher capacity to resist summer bleaching than offshore conspecifics. After corroborating this trend with diverse Orbicella faveolata genotypes exposed to elevated temperatures in the laboratory, a proteomic analysis was taken with a subset of 20 samples via iTRAQ labeling followed by nano-liquid chromatography+mass spectrometry; 46 host coral and 40 Symbiodiniaceae dinoflagellate proteins passed all stringent quality control criteria, and the partial proteomes of biopsies of 1) healthy controls, 2) sub-lethally-stressed samples, and 3) actively bleaching corals differed significantly from one another. The proteomic data were then used to train predictive models of coral colony bleaching susceptibility, and both generalized multivariate regression and neural network models were capable of doing so with 100% accuracy. Successful future testing of the predictive power of these models in situ will establish the capacity to monitor coral health on a proactive, pre-death timescale.

Resources

Name Format Description Link
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/242879
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Related samples and analysis https://www.ncei.noaa.gov/archive/accession/0227133
0 Institution web page https://www.aoml.noaa.gov/
0 Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI https://doi.org/10.25345/C55Z0Q
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/0242879
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 16. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 16. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/242879
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 16. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 16. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0191/0242879/
0 Institution web page https://cimas.earth.miami.edu/
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/0242879
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/242879
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/242879
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0191/0242879/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI https://doi.org/10.25345/c55z0q
0 Related samples and analysis https://www.ncei.noaa.gov/archive/accession/0227133
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/0242879
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/242879
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/242879
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0191/0242879/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI https://doi.org/10.25345/c55z0q
0 Related samples and analysis https://www.ncei.noaa.gov/archive/accession/0227133
0 Institution web page https://cimas.earth.miami.edu/
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/0242879
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/242879
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/242879
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0191/0242879/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI https://doi.org/10.25345/c55z0q
0 Related samples and analysis https://www.ncei.noaa.gov/archive/accession/0227133
0 Institution web page https://cimas.earth.miami.edu/
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/0242879
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/242879
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/242879
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0191/0242879/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI https://doi.org/10.25345/c55z0q
0 Related samples and analysis https://www.ncei.noaa.gov/archive/accession/0227133
0 Institution web page https://cimas.earth.miami.edu/
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/0242879
0 Navigate directly to the URL for a descriptive web page with download links. https://www.ncei.noaa.gov/archive/accession/oas/242879
0 Navigate directly to the URL for data access and direct download. https://www.ncei.noaa.gov/archive/accession/download/242879
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Institution web page https://www.aoml.noaa.gov/
0 Information for contacts at NCEI. https://www.ncei.noaa.gov/contact
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 21. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 Protein sequences, analysis, and code from this study. This repository is typically used by the proteomics community and can house relevant code that can not be archived at NCEI https://doi.org/10.25345/c55z0q
0 Related samples and analysis https://www.ncei.noaa.gov/archive/accession/0227133
0 Institution web page https://cimas.earth.miami.edu/
0 These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP). ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0191/0242879/

Tags

  • molecular genetic analysis
  • florida reef tract
  • predictive model
  • united states of america
  • reef monitoring and assessment
  • genetic data sets
  • corals
  • orbicella faveolata
  • biosphere
  • little conch
  • proteomic analysis
  • monroe county
  • photic zone corals
  • cheeca rocks (24n080w0009)
  • oceanography
  • bleaching thermal stress
  • scleractinia (stony corals)
  • the rocks
  • atlantic ocean
  • earth science
  • gbn1
  • coral diseases
  • upper florida keys
  • 8ehutj
  • bleaching
  • florida
  • q exactive mass spectrometer
  • protein sequences
  • ocean basin
  • conch reef (24n080w0011)
  • zoology
  • north atlantic ocean
  • protein concentration
  • country/territory
  • omics-nrdd18978

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