Description
Genome sequence and annotation files of Lpman haplotype 1 and haplotype 2 genome assembly reported in the manuscript "Haplotype-resolved genome assembly of ‘Manhattan’ perennial ryegrass (Lolium perenne L.) and characterization of drought responsive late embryogenesis abundant genes". Also included is the transposable element (TE) annotation from EDTA and the organelles (chloroplast and mitochondria) genomes with annotation.
Resources
| Name | Format | Description | Link |
|---|---|---|---|
| prg_genomev1.0_hap1.fasta.gz | G-Zipped | Open resource | |
| prg_genomev1.0_hap2.fasta.gz | G-Zipped | Open resource | |
| prg_annotationv1.0_hap1.gff | Unknown | Open resource | |
| prg_annotationv1.0_hap2.gff | Unknown | Open resource | |
| prg_annotationv1.0_hap1_proteins.fasta | Unknown | Open resource | |
| prg_annotationv1.0_hap2_proteins.fasta | Unknown | Open resource | |
| prg_annotationv1.0_hap1_transcripts.fasta | Unknown | Open resource | |
| prg_annotationv1.0_hap2_transcripts.fasta | Unknown | Open resource | |
| prg_genomev1.0_hap1.fasta.mod.EDTA.TEanno.gff3 | Unknown | Open resource | |
| prg_genomev1.0_hap2.fasta.mod.EDTA.TEanno.gff3 | Unknown | Open resource | |
| Lpan_chloro.gff3 | Unknown | Open resource | |
| Lpman_chloro.fasta | Unknown | Open resource | |
| Lpman_mito.fasta | Unknown | Open resource | |
| Lpman_mito.gff3 | Unknown | Open resource | |
| BioProject: PRJNA1247930 Lpman haplotype 2 genome assembly | XML | Open resource | |
| BioProject: PRJNA1247931 Lpman haplotype 1 genome assembly | XML | Open resource |