Cytoscape file of chemical networks
Description
The maximum connectivity scores of pairwise chemical conditions summarized from Cmap results in a file with Cytoscape format (http://www.cytoscape.org/). The figures in the publication were generated from this file. The Cytoscape file is formed from importing the eight text file therein.
This dataset is associated with the following publication:
Wang , R., A. Biales , N. Garcia-Reyero, E. Perkins, D. Villeneuve, G. Ankley, and D. Bencic. Fish Connectivity Mapping: Linking Chemical Stressors by Their MOA-Driven Transcriptomic Profiles. BMC Genomics. BioMed Central Ltd, London, UK, 17(84): 1-20, (2016).
Resources
| Name |
Format |
Description |
Link |
|
57 |
CmapCytoScapeFigures.zip |
https://pasteur.epa.gov/uploads/137/CmapCytoScapeFigures.zip |
Tags
- mechanisms-of-action
- chemicals
- networks
- toxicology
- connectivity-mapping
- fish
- ecotoxicology
- exposure
- gene-expression-profiles