BPA genetic monitoring - BPA Genetic Monitoring of Snake River Chinook Salmon and Steelhead

Description

This is a long-term (30-year) NWFSC Genetics and Evolution Program study to monitor the genetic characteristics and population dynamics of hatchery- and natural-origin Chinook salmon and steelhead in the Snake River Basin, which are both species listed as threatened under the US Endangered Species Act. Genetic tools are used to determine if naturally spawning hatchery fish are influencing the adaptive potential and viability of wild fish in the basin. This work involves long-term annual field work to collect DNA from threatened Chinook salmon and steelhead at numerous locations throughout the Snake and Salmon River Basin and analyze the genetic signatures from the collections in the context of a long-term historical baseline of hatchery production and natural variation in wild salmonid production there. Initiated in 1989, this study monitors genetic changes associated with hatchery propagation in multiple Snake River sub-basins for Chinook salmon and steelhead. We also derive estimates of reproductive success for individual families and groups of fish. The information obtained from this study directly addresses a critical knowledge gap identified by comanagers, which is: under what conditions does hatchery supplementation provide a sustained contribution to natural production? Co-managers are ODFW, CTUIR, NPT, WDFW, IDFG, and SBT. This type of monitoring work is now an essential part of hatchery reform and the goal of using widespread hatchery propagation in recovery of natural populations.

Resources

Name Format Description Link
0 NWFSC Dataset Information page. Initiated in 1989, this study monitors genetic changes associated with hatchery propagation in multiple Snake River sub-basins for Chinook salmon and steelhead. We also derive estimates of reproductive success for individual families and groups of fish. The information obtained from this study directly addresses a critical knowledge gap identified by comanagers, which is: under what conditions does hatchery supplementation provide a sustained contribution to natural production? Co-managers are ODFW, CTUIR, NPT, WDFW, IDFG, and SBT. This type of monitoring work is now an essential part of hatchery reform and the goal of using widespread hatchery propagation in recovery of natural populations. https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/10654
0 View the complete metadata record on InPort for more information about this dataset. https://www.fisheries.noaa.gov/inport/item/18054
33 NOAA Data Management Plan for this record on InPort. https://www.fisheries.noaa.gov/inportserve/waf/noaa/nmfs/nwfsc/dmp/pdf/18054.pdf
0 This is a table of microsatellite genotypes for Little Sheep steelhead included in Berntson et al. 2011. Transactions of the American Fisheries Society 140:685-698. Each locus is represented by two alleles, 3 digits for each allele, where alleles are mobility/size determined, per standard published criteria. Loci are the SPAN suite, described in Blankenship et al. 2011. Transactions of the American Fisheries Society 140:665-684. https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/little_sheep_creek_steelhead
0 Global Change Master Directory (GCMD). 2024. GCMD Keywords, Version 19. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 This is a table of microsatellite genotypes for Little Sheep steelhead included in Berntson et al. 2011. Transactions of the American Fisheries Society 140:685-698. Each locus is represented by two alleles, 3 digits for each allele, where alleles are mobility/size determined, per standard published criteria. Loci are the SPAN suite, described in Blankenship et al. 2011. Transactions of the American Fisheries Society 140:665-684. https://www.webapps.nwfsc.noaa.gov/apex/parr/little_sheep_creek_steelhead/data/page/
0 This is a table of microsatellite genotypes for Little Sheep steelhead included in Berntson et al. 2011. Transactions of the American Fisheries Society 140:685-698. Each locus is represented by two alleles, 3 digits for each allele, where alleles are mobility/size determined, per standard published criteria. Loci are the SPAN suite, described in Blankenship et al. 2011. Transactions of the American Fisheries Society 140:665-684. https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/little_sheep_creek_steelhead
0 This is a table of microsatellite genotypes for Little Sheep steelhead included in Berntson et al. 2011. Transactions of the American Fisheries Society 140:685-698. Each locus is represented by two alleles, 3 digits for each allele, where alleles are mobility/size determined, per standard published criteria. Loci are the SPAN suite, described in Blankenship et al. 2011. Transactions of the American Fisheries Society 140:665-684. https://www.webapps.nwfsc.noaa.gov/apex/parr/little_sheep_creek_steelhead/data/page/
0 Global Change Master Directory (GCMD). 2024. GCMD Keywords, Version 19. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
0 NWFSC Dataset Information page. Initiated in 1989, this study monitors genetic changes associated with hatchery propagation in multiple Snake River sub-basins for Chinook salmon and steelhead. We also derive estimates of reproductive success for individual families and groups of fish. The information obtained from this study directly addresses a critical knowledge gap identified by comanagers, which is: under what conditions does hatchery supplementation provide a sustained contribution to natural production? Co-managers are ODFW, CTUIR, NPT, WDFW, IDFG, and SBT. This type of monitoring work is now an essential part of hatchery reform and the goal of using widespread hatchery propagation in recovery of natural populations. https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/10654
33 NOAA Data Management Plan for this record on InPort. https://www.fisheries.noaa.gov/inportserve/waf/noaa/nmfs/nwfsc/dmp/pdf/18054.pdf
0 View the complete metadata record on InPort for more information about this dataset. https://www.fisheries.noaa.gov/inport/item/18054
0 This is a table of microsatellite genotypes for Little Sheep steelhead included in Berntson et al. 2011. Transactions of the American Fisheries Society 140:685-698. Each locus is represented by two alleles, 3 digits for each allele, where alleles are mobility/size determined, per standard published criteria. Loci are the SPAN suite, described in Blankenship et al. 2011. Transactions of the American Fisheries Society 140:665-684. https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/little_sheep_creek_steelhead
0 This is a table of microsatellite genotypes for Little Sheep steelhead included in Berntson et al. 2011. Transactions of the American Fisheries Society 140:685-698. Each locus is represented by two alleles, 3 digits for each allele, where alleles are mobility/size determined, per standard published criteria. Loci are the SPAN suite, described in Blankenship et al. 2011. Transactions of the American Fisheries Society 140:665-684. https://www.webapps.nwfsc.noaa.gov/apex/parr/little_sheep_creek_steelhead/data/page/
0 View the complete metadata record on InPort for more information about this dataset. https://www.fisheries.noaa.gov/inport/item/18054
0 NWFSC Dataset Information page. Initiated in 1989, this study monitors genetic changes associated with hatchery propagation in multiple Snake River sub-basins for Chinook salmon and steelhead. We also derive estimates of reproductive success for individual families and groups of fish. The information obtained from this study directly addresses a critical knowledge gap identified by comanagers, which is: under what conditions does hatchery supplementation provide a sustained contribution to natural production? Co-managers are ODFW, CTUIR, NPT, WDFW, IDFG, and SBT. This type of monitoring work is now an essential part of hatchery reform and the goal of using widespread hatchery propagation in recovery of natural populations. https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/datasets/dataset/10654
0 Global Change Master Directory (GCMD). 2025. GCMD Keywords, Version 22. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
33 NOAA Data Management Plan for this record on InPort. https://www.fisheries.noaa.gov/inportserve/waf/noaa/nmfs/nwfsc/dmp/pdf/18054.pdf

Tags

  • cb (conservation biology) division
  • hatchery
  • salmon
  • dna sequencer
  • snake river
  • northwest fisheries science center
  • nwfsc montlake
  • snake river basin
  • doc/noaa/nmfs/nwfsc
  • national marine fisheries service
  • noaa. u.s. department of commerce
  • manchester research station
  • artificial propagation
  • unknown physical collection device

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Categories